Posted: 17 Jun 2019 | 14:24
When is enough, enough? With so many parallel programming technologies, should we focus on consolidating them?
At the ISC conference in June I will moderate a panel discussion on whether it is time to focus on the consolidation and interoperability of existing parallel programming technologies, rather than the development of new ones.
Posted: 12 May 2019 | 14:31
The HPC-Europa3 project funds short collaborative “Transnational Access” research visits using HPC.
In just 17 months EPCC has supported 50 HPC-Europa visits from research groups in a total of 15 countries. We are already seeing great results from our visitors, including at least seven publications.
Applications for repeat or reciprocal visits – either between the same researchers, or different members of the same groups – are testimony to the strength of the ongoing collaborative links fostered by the programme. Two of our first HPC-Europa3 visitors have even returned to their former host research groups for longer visits.
Posted: 19 Mar 2019 | 10:16
The Software Sustainability Institute's (SSI) Collaborations Workshop 2019 (CW19) will be held at the West Park Teaching Hub, Loughborough University, Loughborough from 1-3 April 2019. This year the workshop will be themed around topics based on interoperability, documentation, training, and sustainability. Keynote speakers will include Catherine Stihler, CEO of Open Knowledge International, and Franziska Heine (link points to a German article), Head of Software & Development at Wikimedia Deutschland. They will open the event on 1st April.
Posted: 4 Mar 2019 | 09:42
In our role as members of the Research Engineering Group of the Alan Turing Institute, Anna Roubickova and I worked with Efi Tsamoura and Benjamin Spencer (Department of Computer Science at the University of Oxford) on PDQ, a proof-driven query planner that has great potential within the realm of data science for medical research.
Posted: 22 Feb 2019 | 16:09
Peeved with Python? Revolted by R? SAS make you sad? The Julia Language may be for you. Recently reaching version 1.0, Julia claims to be more than just another data science language.
In this post I’ll give a tour of some of the more interesting features of Julia, and its implementation.
Posted: 14 Dec 2018 | 17:33
PickCells is image analysis software developed by the Centre for Regenerative Medicine (CRM) at The University of Edinburgh. PickCells allows biologists to explore multidimensional biological images of stem cell niches, organoids, and embryos. In late October, with the assistance of six researchers, we evaluated the usability of PickCells to help guide its future development.
To run our usability evaluation, we followed Steve Krug's highly-recommended and very readable book "Rocket Surgery Made Easy: The Do-It-Yourself Guide to Finding and Fixing Usability Problems". This book describes a practical way to carry out usability evaluations with minimal overhead.
Posted: 10 Dec 2018 | 10:59
By Raniere Silva, Community Officer at the Software Sustainability Institute.
The Software Sustainability Institute is pleased to announce applications to our Fellowship Programme 2019 are now open. Below we detail the application process and what to expect from us during the recruitment and post-recruitment stages.
Posted: 26 Nov 2018 | 18:07
The community of Edinburgh research software engineers (CERSE) held their second gathering on Wednesday 21st November in the Edinburgh College of Art (ECA) main building.
The meeting was attended by around 50 participants, an interesting mix of researchers, software developers, systems admins and research support/management staff, from the University of Edinburgh and Heriot-Watt University. It is intended to keep these gatherings open to all Higher Education and research institutions of the Edinburgh area.
Posted: 18 Oct 2018 | 12:47
Depending on the layout of the room, you need to make the font on your terminal large enough for all students to see it, which can be somewhat disorientating as an instructor. Moreover if the layout of the room is not ideal, eg some students are facing away from the screen, they will have to constantly turn to see the screen, which can be a pain for them. But I recently found a Python app that changes all that.
Posted: 11 Oct 2018 | 14:52
During the last six months, in our role as members of the Research Engineering Group of the Alan Turing Institute, we have been working with Melissa Terras, University of Edinburgh's College of Arts, Humanities and Social Sciences (CAHSS), and Raquel Alegre, Research IT Services, University College London (UCL), to explore text analysis of humanities data. This work was funded by Scottish Enterprise as part of the Alan Turing Institute-Scottish Enterprise Data Engineering Programme.