Open Source

Better software, better COVID-19 research

Author: Mike Jackson
Posted: 30 Apr 2020 | 10:08

A friend recently forwarded me a tweet from Professor Neil Ferguson, director of J-IDEA and the MRC Centre for Global Infectious Disease Analysis at Imperial College London, concerning their COVID-19 pandemic modeller, used by the UK Government:

"I'm conscious that lots of people would like to see and run the pandemic simulation code we are using to model control measures against COVID-19. To explain the background - I wrote the code (thousands of lines of undocumented C) 13+ years ago to model flu pandemics..." @neil_ferguson - 22 Mar

PickCells and exploratory image analysis in cell biology

Author: Mike Jackson
Posted: 11 Sep 2018 | 16:09

Cells being analysed within PickCells

PickCells is an image analysis platform developed by the Centre for Regenerative Medicine (CRM) at The University of Edinburgh. It combines generic image analysis algorithms, visualisation modules and data mining functionality within a stand-alone Java application.

The Mozilla Lab Global Science Sprint 2015

Author: Mario Antonioletti
Posted: 8 Jun 2015 | 10:03

I had not intended to go to the Mozilla Global Science Sprint 2015. However, EPCC acted as a hub for local developers who wanted to participate and Neil Chue Hong (Director of the Software Sustainability Institute, and based here at EPCC) asked me to set up the room and make the initial connection in case he was unavailable. I managed to set up the servers and then stayed.

So what is the Mozilla Global Science Sprint?

Making waves: TPLS code released as Open Source

Author: Iain Bethune
Posted: 10 Jun 2013 | 12:26

TPLS (Two-Phase Level Set) is a Computational Fluid Dynamics code developed by Dr Prash Valluri of the University of Edinburgh's School of Engineering and Dr Lennon Ó Náraigh of University College Dublin. It simulates the interface between two fluid phases, a phenomenon with a number of industrial applications including oil and gas hydrate transport, cleaning processes, distillation/absorption, and evaporative cooling of microelectronics.

PRACE Industrial Seminar 2013

Author: Paul Graham
Posted: 10 Apr 2013 | 10:20

Next week sees the fifth PRACE seminar for industry users being held at Bad Boll, near Stuttgart in Germany.

The seminar targets industrial users of HPC, who will have an opportunity to learn how PRACE resources, expertise, education and training can contribute to their business success. The seminar will act as a forum to develop or strengthen links with CEOs, CTOs, CIOs and R&D managers coming from large corporations and SMEs, as well as Independent Software Vendors. 

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