Preprints and recent publications of interest include:

  • L. Mitchell, T.M. Sloan, M. Mewissen, P. Ghazal, T. Forster, M. Piotrowski and A.S. Trew,
    A parallel random forest classifier for R.
    Proceedings of the 2nd international workshop on Emerging computational methods for the life sciences, pp 1-6 (2011),
    doi: 10.1145/1996023.1996024. See here.
  • A. Jackson and M. S. Campobasso,
    Shared-memory, distributed-memory, and mixed-mode parallelisation of a CFD simulation code,
    Computer Science - Research and Development, 26, 187 (2011).
    See here
  • A. Jackson, F. Reid, S. Booth, J. Hein, J. Westerholm, M. Aspnäs, M. Català, and A. Soba,
    Parallel Optimisation Strategies for Fusion Codes,
    Proceedings of the 19th International Euromicro Conference on Parallel, Distributed and Network-Based Processing, PDP, p. 357-364 (2011).
    See here
  • A. Jackson, F. Reid, J. Hein, A. Soba, and X. Sáez,
    High Performance I/O,
    Proceedings of the19th International Euromicro Conference on Parallel, Distributed and Network-Based Processing, PDP, pp. 349-356 (2011).
    See here
  • S. Niederer, L. Mitchell, N. Smith and G. Plank,
    Simulating human cardiac physiology on clinical timescales,
    Frontiers in Physiology 2:14 (2011).
    See doi: 10.3389/fphys.2011.00014

  • M. G. Beckett, P. Coddington, B. Joo, C. M. Maynard, D. Pleiter, O. Tatebe, and T. Yoshie,
    Building the International Lattice Data Grid,
    Computer Physics Communications 182 1208 (2011).
    See here.

  • O. Henrich, K. Stratford, M.E. Cates and D. Marenduzzo,
    Structure of Blue Phase III of Cholesteric Liquid Crystals,
    Physical Review Letters 106 107801 (2011).
    See here

  • J. Muller, S. Simon, U. Motschmann, J. Schule, K.-H. Glassmeier, and G.J. Pringle,
    A.I.K.E.F.: Adaptive Hybrid Model for Space Plasma Simulations,
    Computer Physics Communications 182, 946-966 (2011).
    See Comp. Phys. Comm. doi:10.1016/j.cpc.2010.12.033.

  • D.A. Wann, A.R. Turner, J.R. Goerlich, L.J. Kettle, R. Schmutzler and D.W.H. Rankin,
    Gas-phase structures of 1-adamantylphosphines,
    Structural Chemistry DOI:10.1007/s11224-010-9695-6 (2010).
    Available here

  • B. Dobrzelecki, A. Krause, A. Hume, A. Grant, M. Antonioletti, T. Alemu, M. Atkinson, M. Jackson and E. Theocharopoulos,
    Integrating distributed data sources with OGSADAI DQP and Views,
    Phil. Trans. R. Soc. A 368 4133-4145 (2010).
    See DOI: 10.1098/rsta.2010.0166.

  • P. Strand, B. Guillerminet, I. Campos Plasencia, J.M. Cela, R. Coelho, D. Coster, L.-G. Eriksson, M. Haefele, F. Iannone, F. Imbeaux, A. Jackson, G. Manduchi, M. Owsiak, M. Plociennik, A. Soba, E. Sonnendrucker, J. Westerholm,
    A European Infrastructure for Fusion Simulations,
    Proceedings of the 18th Euromicro Conference on Parallel, Distributed and Network-based Processing, pp. 460-467 (2010).
  • T.C. Hammant, R.R. Horgan, C.J. Monahan, A.G. Hart, E.H. Muller, A. Gray, K. Sivalingham, G.M. von Hippel,
    Improved automated lattice perturbation theory in background field gauge,
    PoS LATTICE2010:043, (2010).
    Available here
  • L. Mitchell, M. Bishop, E. Hoetzl, A. Neic, M. Liebmann, G. Haase, and G. Plank,
    Modeling Cardiac Electrophysiology at the Organ Level in the Peta FLOPS Computing Age,
    AIP Conference Proceedings, Eds. T.E. Simos, G. Psihoyios, and Ch. Tsitouras, 1281, 407-410 (2010).
    See doi 10.1063/1.3498492.
  • S. Lawson, G. Barakos and A. Simpson,
    Understanding Cavity Flows using Proper Orthogonal Decomposition and Signal Processing.
    Journal of Algorithms and Computational Technology, 4, 47-70 (2010).
    doi: 10.1260/1748-3018.4.1.47.
  • J.M. Bull, J. Enright, X. Guo, C.M. Maynard, F.R. Reid,
    Performance Evaulation of Mixed-Mode OpenMP/MPI Implementations,
    International Journal of Parallel Programming 38, 396-417 (2010).
    See DOI: 10.1007/s10766-010-0137-2 .

  • F.R. Reid,
    The NEMO Ocean Modelling Code: A Case Study.,
    Proceedings of the Cray User Group meeting, 2010.
    Available here.

  • S. Petrou, T.M. Sloan, M. Mewissen, T. Forster, M. Piotrowski and B. Dobrzelecki,
    Optimization of a parallel permutation testing function for the SPRINT R package,
    HPDC’10 Proceedings of the 19th ACM International Symposium on High Performance Distributed Computing 2010.
    See doi:10.1145/1851476.1851551 .

  • I. Bethune, Improving the Performance of CP2K on the Cray XT,
    Proceedings of the Cray User Group 2010. Available here.
  • L. Han, S. Potter, G. Beckett, G. Pringle, S. Welch, S.-H. Koo, G. Wickler, A. Usmani, J. L. Torero and A. Tate,
    “FireGrid: An e-Infrastructure for Next-Generation Emergency Response Support”,
    Journal of Parallel and Distributed Computing, Volume 70, Issue 11, November 2010, pp. 1128–1141.
  • W. Gentzsch, A. Kennedy, H. Lederer, G. Pringle, J. Reetz, M. Riedel, B. Schuller, A. Streit, and J. Wolfrat,
    DEISA: e-Science in a Collaborative, Secure, Interoperable and User-Friendly Environment.
    Proceedings of the e-Challenges Conference, Warsaw, Poland, 2010.
  • J. S. Lintuvuori, K. Stratford, M. E. Cates, and D. Marenduzzo,
    Colloids in Cholesterics: Size-Dependent Defects and Non-Stokesian Microrheology,
    Physical Review Letters 105, 178302 (2010).
    See DOI: 10.1103/PhysRevLett.105.178302.
  • A Pokhilko, SK Hodge, K Stratford, K Knox, KD Edwards, AW Thomson, T Mizuno, and AJ Millar
    Data assimilation constrains new connections and components in a complex, eukaryotic circadian clock model,
    Molecular Systems Biology, 6, doi:10.1038/msb.2010.69 (2010).
  • O. Henrich, K. Stratford, D. Marenduzzo, and M.E. Cates,
    Ordering dynamics of blue phases entails kinetic stabilization of amorphous networks,
    Proc. Natl. Acad. Sci., 107, 13212–13215 (2010);
    doi:10.1073/pnas.1004269107
  • L. Mitchell, D. Henty and G. Beckett,
    A survey of Scientific Computing in the UK,
    EPCC Technical Report (2010).
    Available here: nais2010.pdf
  • A. Jackson, A. Carter, J. Hein, J. Westerholm, M. Aspnäs, M. Ropo, A. Soba,
    “EUFORIA HPC: Massive Parallelisation for Fusion Community”,
    pp.489-497, 18th Euromicro Conference on Parallel, Distributed and Network-based Processing, 2010
  • M. Weiland,
    Profile of scientific applications on HPC architectures using the DEISA
    Benchmark Suite,
    Computer Science Research and Development 25, 1-2, 2010.

  • A. Kennedy and H. Lederer,
    DEISA Extreme Computing Initiative (DECI) and Science Community Support,
    in Parallel Computing: From Multicores and GPU’s to Petascale
    B. Chapman et al. (Eds.) IOS Press 2010.
  • W. Marurngsith and R. N. Ibbett,
    Specification-based Verification in a Distributed Shared Memory Simulation
    Model, Simulation, pp 229-245, 2010.

    See http://sim.sagepub.com/content/vol86/issue4/

  • L. Mitchell and M. E. Cates,
    Hawkes process as a model of social interactions: a view on video dynamics,
    J. Phys. A: Math. Theor. 43 045101 (2010).
    doi: 10.1088/1751-8113/43/4/045101
  • F. Scharinger, F.R. Reid, P.J. Graham, A.S. Trew, A. Tenesa, S. Farrington, H. Campbell, and M.G. Dunlop,
    The Search for Gene-Gene Interactions in Colorectal Cancer: Using HPC to Overcome Computational Barriers,
    International Workshop on High Performance Computational Systems Biology, Trento, 2009.
    See ISBN 978-0-7695-3809-9

  • L. Mitchell and G.J. Ackland,
    Boom and bust in a continuous time evolving economic model,
    European Physical Journal B, 70, 567-573 (2009).
    See DOI: 10.1140/epjb/e2009-00243-y.
  • M. Antonioletti, T. Blanke, G. Bodard, M. Hedges, A. Hume, M. Jackson, and S. Rajbhandari,
    Building bridges between islands of data - an investigation into distributed data management in the humanities,
    Proceedings of the 5th IEEE International Conference on e-Science, pp. 33-39 (2009).
    ISBN 978-0-7695-3877-8.

  • M. G. Beckett, C. R. Allton, C. T.H. Davies, I. Davis, J. M. Flynn, E. J. Grant, R. Hamilton, A. C. Irving, R. D. Kenway, R. H. Ostrowski, J. T. Perry, J. R. Swedlow, A. S. Trew,
    Building a scientific data grid with DiGS,
    Phil. Trans. R. Soc. A 367 (2009).
  • G. Wickler, G. Beckett, L. Han, S.-H. Koo, S. Potter, G. Pringle and A. Tate,
    Using Simulation for Decision Support: Lessons Learned from FireGrid,
    Proceedings of the 6th International Conference on Information Systems for Crisis Response and Management (ISCRAM 2009), 2009.
  • M.E. Cates, O. Henrich, D. Marenduzzo, and K. Stratford,
    Lattice Boltzmann simulations of liquid crystalline fluids: active gels and blue phases
    Soft Matter 5, 2009.
    DOI: 10.1039/b908659p
  • W. Marurngsith and R. N. Ibbett,
    DSiMCluster: A Simulation Model for Efficient Memory Analysis Experiments of DSM Clusters, Simulation, , pp 355-374, 2009.See http://sim.sagepub.com/content/vol85/issue6/
  • P. Graham, J. Nowell, K. Kavoussanakis, F. Scharinger, C. Palansuriya, B. Dobrzelecki, A. Trew,
    The ProbesCoordination Protocol: Periodic Task Coordination and Control across Administrative Boundaries, Fifth International Conference on Networking and Services, INCS pp. 462-467, 2009.See http://doi.ieeecomputersociety.org/10.1109/ICNS.2009.74
  • C. Palansuriya, J. Nowell, F. Scharinger, K. Kavoussanakis, A. Trew,
    A Standards-Based Alarms Service for Monitoring Federated Networks,
    Fifth International Conference on Networking and Services, ICNS pp. 522-525, 2009See http://doi.ieeecomputersociety.org/10.1109/ICNS.2009.81
  • R. Upadhyay, G. Pringle, G. Beckett, S. Potter, L. Han, S. Welch, A. Usmani, and J. Torero,
    An Architecture for an Integrated Fire Emergency Response System for the Built Environment
    Proceedings of the 9th International Symposium on Fire Safety Science pp 427-438, (2009).See http://hdl.handle.net/1842/2703.
  • J. Nowell, K. Kavoussanakis, C. Palansuriya, M. Piotrowski, F. Scharinger, P. Graham, B. Dobrzelecki and A. Trew,
    Standards-based network monitoring for the grid,
    Phil. Trans. R. Soc. A. doi:10.1098/rsta.2009.0033 (2009).See http://rsta.royalsocietypublishing.org/content/367/1897/2495
  • E. Kim, K. Stratford, P.J. Camp, and M.E. Cates,
    Hydrodynamic Interactions in Colloidal Ferrofluids: A Lattice Boltzmann Study
    Journal of Physical Chemistry B, 3681 (2009).See Journal of Physical Chemistry.

A full list of publications by year is given in the library section.

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