Modelling & simulation
Posted: 24 Feb 2016 | 16:41
Or why debugging is hard and parallel debugging doubly so
Debugging programs is hard. I give a lecture on debugging for the Programming Skills module of EPCC's MScs in HPC and HPC with Data Science where we try to point out common programming mistakes, programming strategies for making bugs less likely, and the skills and tools required for investigating, identifying, and fixing bugs.
Posted: 15 Feb 2016 | 15:38
In early December we added a visualisation of the most heavily used application codes to the ARCHER website. At the moment it only shows data for the current month, but we've been recording the data since the ARCHER service began back in 2013 (table below).
Posted: 31 Jan 2016 | 23:07
Lancaster University, 7-8 April 2016
The programme for the HPC-CORE (High Performance Computing-based Computational fluid dynamics for Offshore Renewable Energy) workshop has now been published. This event brings together scientific specialists from Engineering, Atmospheric and Environmental Sciences, and HPC experts to discuss the state of the art for simulation software, and the leading-edge simulations being undertaken with such software.
Posted: 11 Dec 2015 | 14:39
The Met Office/NERC Cloud model (MONC) has been developed in a collaboration between EPCC and the Met Office. MONC delivers a highly scalable and flexible Large Eddy Simulation (LES) model capable of simulating clouds and other turbulent flows at resolutions of tens of metres on very large domains.
Posted: 19 Nov 2015 | 11:11
One of the projects I'm currently leading at EPCC is ExTASY, which is building an 'Extensible Toolkit for Advanced Sampling and analYsis'. I've blogged in the past about the goals of the project, and the painful process leading up to our first public release. As the project is now well into its final year, we are turning our attention to community outreach - showing off what we have built to the biomolecular simulation community and getting their feedback.
Posted: 5 Oct 2015 | 12:24
Since 2013, EPCC has hosted PRACE Summer of HPC (SoHPC) students for eight weeks from early July. I was involved with SoHPC for the first time this year as mentor of two Masters students, Jana Boltersdorf from FH Aachen University of Applied Sciences (Germany) and Ondřej Vysocký from Brno University of Technology (Czech Republic).
Posted: 22 Sep 2015 | 15:48
The Fortissimo Marketplace is now open for business.
Fortissmo lowers the barriers for industrial users to access HPC-based simulation by offering the benefits of the cloud computing model (such as pay-per-use), together with support for first time users. Making HPC simulation more accessible to SMEs will increase their competitiveness - one of the key goals of the I4MS programme that supports Fortissimo.
Posted: 20 Jul 2015 | 17:12
Experiences of porting and optimising code for Xeon Phi processors
EPCC is jointly organising a symposium at the ParCo conference on experiences from those working on porting and optimising codes for this architecture about the challenges and successes they have experienced when working with the Xeon Phi, and how these also apply to standard parallel computing hardware.
Posted: 21 Jun 2015 | 20:02
The final analysis and future plans
A week ago we finished our 5 days of intensive work optimising CP2K (and to a lesser extent GS2) for Xeon Phi processors. As discussed in previous blog posts (Day4, Day3, Day2, Day1), this was done in conjunction with research engineers from Colfax, and built on the previous year's work on these codes by EPCC staff through the Intel-funded IPCC project.
Posted: 8 Jun 2015 | 16:41
Over 18 months ago, we kicked off the ExTASY project. Our lofty aim was to tackle one of the 'Grand Challenges' of biochemistry - effective sampling of complex biomolecules using Molecular Dynamics to provide a physical understanding of their function and behaviour.