Mike Jackson's blog
Posted: 9 Jul 2014 | 12:04
ARCHER, the UK's national supercomputing service, offers training in software development and high-performance computing to scientists and researchers across the UK. As part of our training service EPCC is running a two-day Software Carpentry boot camp at Imperial College London, UK, on 16-17 September.
Posted: 30 May 2014 | 15:03
ARCHER, the UK's new national supercomputing service, offers training in software development and high-performance computing to scientists and researchers across the UK. As part of our training service EPCC is running a three-day Software Carpentry boot camp and Introduction to Scientific Programming in Python at Cranfield University, UK, on 21-23 July.
Posted: 28 Apr 2014 | 16:20
Mathematical modelling of complex fluid flows has practical application within many industrial sectors including energy, the environment and health. Flow modelling can include oil and gas flows in long-distance pipelines or refinery distillation columns, liquid cooling of micro-electronic devices, carbon capture and cleaning processes, water treatment plants, blood flows in arteries, and enzyme interactions. Multi-phase flow modelling models flows consisting of gases, fluids and solids within a single system eg steam and water, or oil and gas within a pipe, or coal dust in the air.
Posted: 7 Apr 2014 | 07:33
Michael Chappell leads the Quantitative Biomedical Inference (QuBIc) research group within the Institute of Biomedical Engineering at the University of Oxford. Michael has developed a method of processing functional magnetic resonance image (MRI) data that can be used to recognise blood flow patterns in the brain. I have been helping Michael through one of The Software Sustainability Institute's consultancy projects, which he applied for through the Institute's open call. Part of our collaboration looked at issues around integrating Subversion or Git repositories with CVS.
Posted: 13 Mar 2014 | 15:07
LabBook is a mobile app and online service that allows users to securely record and share their experiment notes. LabBook's developers - Mark Woodbridge, Geraint Barton and Derek Huntley of Imperial College London's Bioinformatics Support Service - asked The Software Sustainability Institute for consultancy as part of the Institute's open call.
I've been working with them to provide advice on the LabBook software, how it is developed, and how it can be moved towards an open source product.
Posted: 11 Dec 2013 | 13:08
Posted: 2 Oct 2013 | 14:07
EPCC is hosting a Software Carpentry boot camp on 3-4 December 2013. The boot camp is designed to teach software development skills to researchers, helping them to do more in less time and with less pain.
Posted: 26 Aug 2013 | 10:21
I ran the latest instalment of The Software Sustainability Institute's "What Makes Good Code Good" discussions at INTECOL13 in London's Docklands on 21st August.
I attended at the invitation of Matthew Smith from the BES Computational Ecology Specialist Interest Group and Microsoft Research, and Greg Wilson from Software Carpentry. I'd expected about 20 attendees and was pleasantly surprised (nay, stunned) when about 100 turned up.
Posted: 25 Jul 2013 | 10:44
Since June 2012, The Software Sustainability Institute and Software Carpentry have been working with the DiRAC consortium to develop a "driving test" or basic software skills aptitude test. The test is now ready to be rolled out across DiRAC, the UK's integrated supercomputing facility for theoretical modelling and HPC-based research in particle physics, astronomy and cosmology.
Posted: 19 Jul 2013 | 07:35
This week I was in Bath to lead a Software Carpentry boot camp organised by Software Sustainability Institute fellow, Alex Chartier. I was joined by Chris Woods from the University of Bristol, who made his instructor debut. The SSI fellow Manchester fellow, Michael Croucher, also came along to help out.