Mike Jackson's blog

ARCHER Software Carpentry workshop at EPCC

Author: Mike Jackson
Posted: 7 Oct 2014 | 13:14

ARCHER, the UK's national supercomputing service, offers training in software development and high-performance computing to scientists and researchers across the UK. As part of our training service, we are running a two-day Software Carpentry workshop here at EPCC from 3-4 December.

ARCHER Software Carpentry boot camp at Imperial College London

Author: Mike Jackson
Posted: 9 Jul 2014 | 12:04

ARCHER, the UK's national supercomputing service, offers training in software development and high-performance computing to scientists and researchers across the UK. As part of our training service EPCC is running a two-day Software Carpentry boot camp at Imperial College London, UK, on 16-17 September.

ARCHER Software Carpentry boot camp and Introduction to Scientific Programming in Python

Author: Mike Jackson
Posted: 30 May 2014 | 15:03

ARCHER, the UK's new national supercomputing service, offers training in software development and high-performance computing to scientists and researchers across the UK. As part of our training service EPCC is running a three-day Software Carpentry boot camp and Introduction to Scientific Programming in Python at Cranfield University, UK, on 21-23 July.

CFD: parallel sustainability with TPLS

Author: Mike Jackson
Posted: 28 Apr 2014 | 16:20

Mathematical modelling of complex fluid flows has practical application within many industrial sectors including energy, the environment and health. Flow modelling can include oil and gas flows in long-distance pipelines or refinery distillation columns, liquid cooling of micro-electronic devices, carbon capture and cleaning processes, water treatment plants, blood flows in arteries, and enzyme interactions. Multi-phase flow modelling models flows consisting of gases, fluids and solids within a single system eg steam and water, or oil and gas within a pipe, or coal dust in the air.

Exploring the integration of Subversion and Git with CVS

Author: Mike Jackson
Posted: 7 Apr 2014 | 07:33

A brain scan.Michael Chappell leads the Quantitative Biomedical Inference (QuBIc) research group within the Institute of Biomedical Engineering at the University of Oxford. Michael has developed a method of processing functional magnetic resonance image (MRI) data that can be used to recognise blood flow patterns in the brain. I have been helping Michael through one of The Software Sustainability Institute's consultancy projects, which he applied for through the Institute's open call. Part of our collaboration looked at issues around integrating Subversion or Git repositories with CVS.

Re-imagining the lab. Or, when science meets art

Author: Mike Jackson
Posted: 13 Mar 2014 | 15:07

LabBook being used with a tablet and stylusLabBook is a mobile app and online service that allows users to securely record and share their experiment notes. LabBook's developers - Mark Woodbridge, Geraint Barton and Derek Huntley of Imperial College London's Bioinformatics Support Service - asked The Software Sustainability Institute for consultancy as part of the Institute's open call.

I've been working with them to provide advice on the LabBook software, how it is developed, and how it can be moved towards an open source product.

Software Carpentry returns to Edinburgh

Author: Mike Jackson
Posted: 11 Dec 2013 | 13:08
 
On the 3rd of December, Software Carpentry returned to Edinburgh with EPCC hosting a boot camp as part of our involvement in both the PRACE Advanced Training Centre and The Software Sustainability Institute.

Software Carpentry Boot Camp: 3-4 December, Edinburgh

Author: Mike Jackson
Posted: 2 Oct 2013 | 14:07

EPCC is hosting a Software Carpentry boot camp on 3-4 December 2013. The boot camp is designed to teach software development skills to researchers, helping them to do more in less time and with less pain.

"What Makes Good Code Good?" at INTECOL13

Author: Mike Jackson
Posted: 26 Aug 2013 | 10:21

London Docklands

I ran the latest instalment of The Software Sustainability Institute's "What Makes Good Code Good" discussions at INTECOL13 in London's Docklands on 21st August.

I attended at the invitation of Matthew Smith from the BES Computational Ecology Specialist Interest Group and Microsoft Research, and Greg Wilson from Software Carpentry. I'd expected about 20 attendees and was pleasantly surprised (nay, stunned) when about 100 turned up. 

DiRAC driving test ready to roll

Author: Mike Jackson
Posted: 25 Jul 2013 | 10:44

Since June 2012, The Software Sustainability Institute and Software Carpentry have been working with the DiRAC consortium to develop a "driving test" or basic software skills aptitude test. The test is now ready to be rolled out across DiRAC, the UK's integrated supercomputing facility for theoretical modelling and HPC-based research in particle physics, astronomy and cosmology.

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