Research papers

riboviz 2: A flexible and robust ribosome profiling data analysis and visualization workflow

Cope, A. L., Anderson, F., Favate, J., Jackson, M., Mok, A., Kurowska, A., Liu, J., MacKenzie, E., Shivakumar, V., Tilton, P., Winterbourne, S., Xue, S., Kavoussanakis, K., Lareau, L. F., Shah, P. & Wallace, E. W. J., 15 Apr 2022, In: Bioinformatics. 38, 8, p. 2358-2360 4 p., btac093.

Research output: Contribution to journal › Article › peer-review

The Gravitational-wave Optical Transient Observer (GOTO): Prototype performance and prospects for transient science

Steeghs, D., Galloway, D. K., Ackley, K., Dyer, M. J., Lyman, J., Ulaczyk, K., Cutter, R., Mong, Y. L., Dhillon, V., O'Brien, P., Ramsay, G., Poshyachinda, S., Kotak, R., Nuttall, L. K., Pallé, E., Breton, R. P., Pollacco, D., Thrane, E., Aukkaravittayapun, S., Awiphan, S., & 33 othersBurhanudin, U., Chote, P., Chrimes, A., Daw, E., Duffy, C., Eyles-Ferris, R., Gompertz, B., Heikkilä, T., Irawati, P., Kennedy, M. R., Killestein, T., Kuncarayakti, H., Levan, A. J., Littlefair, S., Makrygianni, L., Marsh, T., Mata-Sanchez, D., Mattila, S., Maund, J., McCormac, J., Mkrtichian, D., Mullaney, J., Noysena, K., Patel, M., Rol, E., Sawangwit, U., Stanway, E. R., Starling, R., Strøm, P., Tooke, S., West, R., White, D. J. & Wiersema, K., 1 Apr 2022, In: Monthly Notices of the Royal Astronomical Society. 511, 2, p. 2405-2422 18 p.

Research output: Contribution to journal › Article › peer-review

The Geobattery Concept: A geothermal circular heat network for the sustainable development of near surface low enthalpy geothermal energy to decarbonise heating

Fraser Harris, G., McDermott, C., Receveur, M., Mouli-Castillo, J., Todd, F., Cartwright-Taylor, A., Gunning, A. & Parsons, M., 28 Mar 2022, In: Earth Science, Systems and Society (ES3). 24 p., 10047.

Research output: Contribution to journal › Article › peer-review

Mortality Among Adults With Cancer Undergoing Chemotherapy or Immunotherapy and Infected With COVID-19

Várnai, C., Palles, C., Arnold, R., Curley, H. M., Purshouse, K., Cheng, V. W. T., Booth, S., Campton, N. A., Collins, G. P., Hughes, D. J., Kulasekararaj, A. G., Lee, A. J. X., Olsson-brown, A. C., Sharma-oates, A., Van Hemelrijck, M., Lee, L. Y. W., Kerr, R., Middleton, G., Cazier, J., Pugh, S. & 129 others, Corrie, P., Bedair, A., Hewish, M., Leonard, P., Illingworth, J., Hibbs, S., Diamantis, N., Massalha, S., Fuller, C., Usbourne, C., Gilbert, D., Davies, J., Newsom-davis, T., Sharkey, R., Lee, R., Tivey, A., Shotton, R., Griffin, C., Horsley, L., Shamas, S., Sacco, J. J., Choudhury, M., Noble, J., Shaw, H., Bolton, R., Ferreira, A., Hall, P., Ramage, P., Bhosle, J., Massey, A., Hill, M., Mukherjee, L., Ghaus, A., Derby, S., Brown, S., Lowndes, S., Dolly, S., Russell, B., Moss, C., Muller, D., Pillai, A., Lowe, S., Cook, L., Scrase, C., Jyothirmayi, R., Board, R., Cornthwaite, S., Parikh, S., Cattell, E., Cox, N., Gault, A., Moody, S., Dobeson, C., Baxter, M., Roques, T., Pawsey, A., Oakes, R., Melcher, L., Chan, O., Ayers, S., Bowyer, H., Althohami, M., Mittal, S., Feeney, L., Aujayeb, A., Sheikh, O., Kathirgamakarthigeyan, S., Woodcock, V., Holt, F., Wyatt, S., Topping, O., Tilby, M., Bhattacharyya, M., Burke, E., Ellis, S., Chacko, J., Rabbi, T., Rowe, M., Sargent, R., Thirlwell, C., Gibson, J., Goldstein, R., Fittall, M., Gennatas, S., Okines, A., Best, J., Tillett, T., Renninson, E., Grumett, S., Barrington, C., Pettengell, R., Peng, Y., Chackathayil, J., Akingboye, A., Hollis, H., Shin Chin, I., Bisht, V., Hartley, S., Middleton, C. P., Goel, A., Protheroe, E., Naksukpaiboon, P., Anil, I., Michell, J., D'costa, J., Wu, A., Ottaviani, D., Soosaipillai, G., Galazi, M., Chopra, N., Benafif, S., Sng, C. C., Wong, S. Y., Scott-brown, M., Copson, E., Robinson, T., Hudson, Z., Smith, F., Abdulnabi Mohamed, A., Angelakas, A., Eastlake, L., Poon-king, A., Brunner, C., Kwan, A., Maynard, A., Boyce, H., Spurrell, E., Peck, R. & Kurec, B., 21 Feb 2022, (E-pub ahead of print) In: JAMA Network Open. 5, 2, p. e220130

Research output: Contribution to journal › Article › peer-review

Communicating absolute fracture risk reduction and the acceptance of treatment for osteoporosis

Ralston, K. A. P., Phillips, J., Krause, A., Hauser, B. & Ralston, S. H., 13 Feb 2022, In: Calcified Tissue International and Musculoskeletal Research.

Research output: Contribution to journal › Article › peer-review

Exploiting dynamic sparse matrices for performance portable linear algebra operations

Stylianou, C. & Weiland, M., 2022, p. 47-57. 11 p.

Research output: Contribution to conference › Paper › peer-review

Porting incompressible flow matrix assembly to FPGAs for accelerating HPC engineering simulations

Brown, N., 20 Dec 2021, 2021 IEEE/ACM International Workshop on Heterogeneous High-performance Reconfigurable Computing (H2RC). Institute of Electrical and Electronics Engineers (IEEE), p. 9-20

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Utilising urgent computing to tackle the spread of mosquito-borne diseases

Brown, N., Nash, R., Poletti, P., Guzzetta, G., Manica, M., Zardini, A., Flatken, M., Vidal, J., Gueunet, C., Belikov, E., Tierny, J., Podobas, A., Chen, W. D., Markidis, S. & Gerndt, A., 20 Dec 2021, 2021 IEEE/ACM HPC for Urgent Decision Making (UrgentHPC). St. Louis, MO, USA: Institute of Electrical and Electronics Engineers (IEEE), p. 36-44

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Research software is essential for research data, so how should governments respond?

Barker, M., Chue Hong, N. P., Katz, D. S., Leggott, M., Treloar, A., van Eijnatten, J. & Aragon, S., 9 Dec 2021, Zenodo, 7 p.

Research output: Working paper › Preprint

Complex Dynamics of Multi-Solid Systems

Boyd, A., Essmann, E., Scott, D., Sawyer, M., Govindarajan, R. & Valluri, P., Nov 2021.

Research output: Contribution to conference › Abstract › peer-review